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<article article-type="research-article" dtd-version="1.3" xmlns:mml="http://www.w3.org/1998/Math/MathML" xmlns:xlink="http://www.w3.org/1999/xlink" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xml:lang="ru"><front><journal-meta><journal-id journal-id-type="publisher-id">aids</journal-id><journal-title-group><journal-title xml:lang="ru">ВИЧ-инфекция и иммуносупрессии</journal-title><trans-title-group xml:lang="en"><trans-title>HIV Infection and Immunosuppressive Disorders</trans-title></trans-title-group></journal-title-group><issn pub-type="ppub">2077-9828</issn><publisher><publisher-name>Baltic Medical Education Center</publisher-name></publisher></journal-meta><article-meta><article-id pub-id-type="doi">10.22328/2077-9828-2021-13-1-70-79</article-id><article-id custom-type="elpub" pub-id-type="custom">aids-611</article-id><article-categories><subj-group subj-group-type="heading"><subject>Research Article</subject></subj-group><subj-group subj-group-type="section-heading" xml:lang="ru"><subject>ОРИГИНАЛЬНЫЕ ИССЛЕДОВАНИЯ</subject></subj-group><subj-group subj-group-type="section-heading" xml:lang="en"><subject>ORIGINAL STUDIES</subject></subj-group></article-categories><title-group><article-title>Первичная лекарственная устойчивость среди впервые выявленных пациентов с ВИЧ-1 в Санкт-Петербурге</article-title><trans-title-group xml:lang="en"><trans-title>Primary HIV drug resistance among newly HIV type-1 diagnosed patients in St. Petersburg</trans-title></trans-title-group></title-group><contrib-group><contrib contrib-type="author" corresp="yes"><name-alternatives><name name-style="eastern" xml:lang="ru"><surname>Ингабире</surname><given-names>Т.</given-names></name><name name-style="western" xml:lang="en"><surname>Ingabire</surname><given-names>Thierry</given-names></name></name-alternatives><bio xml:lang="ru"><p>Тьерри Ингабире — аспирант кафедры инфекционных болезней взрослых и эпидемиологии</p><p>194100, Санкт-Петербург, Литовская ул., д. 2</p></bio><bio xml:lang="en"><p>Thierry Ingabire — Postgraduate student Department of infectious diseases of adults and epidemiology</p><p>194100, Russian Federation, St. Petersburg, Litovskaya, st. 2</p></bio><email xlink:type="simple">ingabire@mail.ru</email><xref ref-type="aff" rid="aff-1"/></contrib><contrib contrib-type="author" corresp="yes"><name-alternatives><name name-style="eastern" xml:lang="ru"><surname>Семенов</surname><given-names>А. В.</given-names></name><name name-style="western" xml:lang="en"><surname>Semenov</surname><given-names>A. V.</given-names></name></name-alternatives><bio xml:lang="ru"><p>Семенов Александр Владимирович — доктор биологических наук, заместитель директора по инновациям, заведующий лабораторией иммунологии и вирусология ВИЧ-инфекции; доцент кафедры клинической лабораторной диагностики</p><p>197101, Санкт-Петербург, ул. Мира, д. 14</p><p>195067, Санкт-Петербург, Пискаревский пр., 47</p></bio><bio xml:lang="en"><p>Semenov Alexander Vladimirovich — Doctor of Biological Sciences, Deputy Director for Innovation, head of the Laboratory of Immunology and virology of HIV infection; Associate Professor at the Department of Clinical Laboratory Diagnostics</p><p>197101, St. Petersburg, st. Mira, 14</p><p>195067, Russia, St. Petersburg, Piskarevsky pr., 47</p><p> </p></bio><xref ref-type="aff" rid="aff-2"/></contrib><contrib contrib-type="author" corresp="yes"><name-alternatives><name name-style="eastern" xml:lang="ru"><surname>Есауленко</surname><given-names>Е. В.</given-names></name><name name-style="western" xml:lang="en"><surname>Esaulenko</surname><given-names>E. V.</given-names></name></name-alternatives><bio xml:lang="ru"><p>Эсауленко Елена Владимировна — доктор медицинских наук профессор, заведующая кафедрой инфекционных болезней взрослых и эпидемиологии; заведующая лабораторией вирусных гепатитов</p><p>194100, Санкт-Петербург, ул. Литовская ул., д. 2</p><p>197101, г. Санкт-Петербург, ул. Мира, 14</p></bio><bio xml:lang="en"><p>Esaulenko Elena Vladimirovna — Doctor of Medical Sciences, Professor, Head of the department of infectious diseases of adults and epidemiology; Head of the laboratory of viral hepatitis</p><p>194100, Russian Federation, St. Petersburg, Litovskaya st. 2</p><p>197101, St. Petersburg, st. Mira, 14</p></bio><xref ref-type="aff" rid="aff-1"/></contrib><contrib contrib-type="author" corresp="yes"><name-alternatives><name name-style="eastern" xml:lang="ru"><surname>Зуева</surname><given-names>Е. В.</given-names></name><name name-style="western" xml:lang="en"><surname>Zueva</surname><given-names>E. B.</given-names></name></name-alternatives><bio xml:lang="ru"><p>Зуева Елена Викторовна — кандидат биологических наук старший научный сотрудник лаборатории молекулярной иммунологии</p><p>197101, Санкт-Петербург, ул. Мира, д. 14</p></bio><bio xml:lang="en"><p>Zueva Elena Viktorovna — сandidate of biological sciences senior researcher, laboratory of molecular immunology</p><p>197101, St. Petersburg, st. Mira, 14</p></bio><xref ref-type="aff" rid="aff-3"/></contrib><contrib contrib-type="author" corresp="yes"><name-alternatives><name name-style="eastern" xml:lang="ru"><surname>Щемелев</surname><given-names>А. Н.</given-names></name><name name-style="western" xml:lang="en"><surname>Schemelev</surname><given-names>A. N.</given-names></name></name-alternatives><bio xml:lang="ru"><p>Щемелев Александр Николаевич — младший научный сотрудник лаборатории иммунологии и вирусология ВИЧ-инфекции</p><p>197101, Санкт-Петербург, ул. Мира, 14</p></bio><bio xml:lang="en"><p>Schemelev Alexander Nikolaevich — junior researcher laboratory of immunology and virology of HIV infection</p><p>197101, St. Petersburg, st. Mira, 14</p></bio><xref ref-type="aff" rid="aff-4"/></contrib><contrib contrib-type="author" corresp="yes"><name-alternatives><name name-style="eastern" xml:lang="ru"><surname>Бушманова</surname><given-names>А. Д.</given-names></name><name name-style="western" xml:lang="en"><surname>Bushmanova</surname><given-names>A. D.</given-names></name></name-alternatives><bio xml:lang="ru"><p>Бушманова Анастасия Дмитриевна — кандидат медицинских наук, ассистент кафедры инфекционных болезней взрослых и эпидемиологии; врач-инфекционист отделения профилактики и диагностики вирусных гепатитов</p><p>194100, Санкт-Петербург, Литовская ул., д. 2</p><p>197101, Санкт-Петербург, ул. Мира, д. 14</p></bio><bio xml:lang="en"><p>Bushmanova Anastasia Dmitrievna — сandidate of Medical Sciences, assistant of the department of infectious diseases of adults and epidemiology; Infectious disease physician department of prevention and diagnosis of viral hepatitis</p><p>194100, Russian Federation, St. Petersburg, Litovskaya st. 2</p><p>197101, St. Petersburg, st. Mira, 14</p></bio><xref ref-type="aff" rid="aff-1"/></contrib></contrib-group><aff-alternatives id="aff-1"><aff xml:lang="ru"><institution>Научно-исследовательский институт эпидемиологии и микробиологии имени Пастера; Первый Санкт-Петербургский государственный медицинский университет</institution><country>Россия</country></aff><aff xml:lang="en"><institution>St. Petersburg Pasteur Institute; Department of infectious diseases of adults and epidemiology, St. Petersburg State Pediatric Medical University</institution><country>Russian Federation</country></aff></aff-alternatives><aff-alternatives id="aff-2"><aff xml:lang="ru"><institution>Научно-исследовательский институт эпидемиологии и микробиологии имени Пастера; Северо-Западный государственный медицинский университет имени И. И. Мечникова</institution><country>Россия</country></aff><aff xml:lang="en"><institution>St. Petersburg Pasteur Institute; North-Western State Medical University named after I. I. Mechnikov</institution><country>Russian Federation</country></aff></aff-alternatives><aff-alternatives id="aff-3"><aff xml:lang="ru"><institution>Научно-исследовательский институт эпидемиологии и микробиологии имени Пастера</institution><country>Россия</country></aff><aff xml:lang="en"><institution>St. Petersburg Pasteur Institute</institution><country>Russian Federation</country></aff></aff-alternatives><aff-alternatives id="aff-4"><aff xml:lang="ru"><institution>Научно-исследовательский институт эпидемиологии и микробиологии имени Пастера; Первый Санкт-Петербургский государственный медицинский университет</institution><country>Россия</country></aff><aff xml:lang="en"><institution>St. Petersburg Pasteur Institute</institution><country>Russian Federation</country></aff></aff-alternatives><pub-date pub-type="collection"><year>2021</year></pub-date><pub-date pub-type="epub"><day>27</day><month>04</month><year>2021</year></pub-date><volume>13</volume><issue>1</issue><fpage>70</fpage><lpage>79</lpage><permissions><copyright-statement>Copyright &amp;#x00A9; Ингабире Т., Семенов А.В., Есауленко Е.В., Зуева Е.В., Щемелев А.Н., Бушманова А.Д., 2021</copyright-statement><copyright-year>2021</copyright-year><copyright-holder xml:lang="ru">Ингабире Т., Семенов А.В., Есауленко Е.В., Зуева Е.В., Щемелев А.Н., Бушманова А.Д.</copyright-holder><copyright-holder xml:lang="en">Ingabire T., Semenov A.V., Esaulenko E.V., Zueva E.B., Schemelev A.N., Bushmanova A.D.</copyright-holder><license xml:lang="ru" license-type="creative-commons-attribution" xlink:href="https://creativecommons.org/licenses/by/4.0/" xlink:type="simple"><license-p>Данная работа распространяется под лицензией Creative Commons Attribution 4.0.</license-p></license><license xml:lang="en" license-type="creative-commons-attribution" xlink:href="https://creativecommons.org/licenses/by/4.0/" xlink:type="simple"><license-p>This work is licensed under a Creative Commons Attribution 4.0 License.</license-p></license></permissions><self-uri xlink:href="https://hiv.bmoc-spb.ru/jour/article/view/611">https://hiv.bmoc-spb.ru/jour/article/view/611</self-uri><abstract><p>У специалистов есть опасения, что широкое использование антиретровирусных препаратов для лечения инфекции, вызванной вирусом иммунодефицита человека 1 (ВИЧ-1), может привести к возникновению передачи лекарственно- устойчивого вируса среди лиц, впервые инфицированных ВИЧ-1. Россия — одна из растущего числа стран, где лекарственно-устойчивый ВИЧ становится серьезной проблемой для здоровья, поскольку он может снизить эффективность антиретровирусной терапии на уровне населения.</p><sec><title>Материалы и методы</title><p>Материалы и методы. Проведен генетический анализ гена pol, полученного из плазмы ВИЧ-1, среди впервые выявленных пациентов с ВИЧ-1, не получавших антиретровирусную терапию, в период с ноября 2018 г. по октябрь 2019 г. в СПБ ГБУЗ «Клинической инфекционной больнице им. С. П. Боткина». Использовали полимеразную цепную реакцию с обратной транскриптазой (ОТ-ПЦР) с последующим прямым секвенированием продуктов ПЦР для определения распространенности мутаций, вызывающих первичную лекарственную устойчивость. Генотипы ВИЧ-1 определяли филогенетическим анализом.</p></sec><sec><title>Результаты</title><p>Результаты. Преобладающим подтипом ВИЧ-1 был A1 (87,2%), далее за ним следовали B (11,8%) и CRF06_cpx (1%). Общая распространенность первичной лекарственной устойчивости составляла 11%. Вирус с известными мутациями, придающими устойчивость к любым ингибиторам нуклеозидной обратной транскриптазы (НИОТ), был обнаружен у 8 человек, к любым не-НИОТ — у 5 пациентов и к любым ингибиторам протеаз — в одном случае. Вирус с множественной лекарственной устойчивостью выявлен у 2 человек (2%).</p></sec><sec><title>Заключение</title><p>Заключение. Распространение генотипов ВИЧ-1 в Санкт-Петербурге (Россия) разнообразно. Растущая распространенность первичной лекарственной устойчивости у пациентов, ранее не получавших антиретровирусную терапию, демонстрирует важность постоянного мониторинга из-за проблем, которые возникают при дальнейшем лечении.</p></sec></abstract><trans-abstract xml:lang="en"><p>There is concern that the widespread use of antiretroviral drugs (ARV) to treat human immunodeficiency virus 1 (HIV-1) infection may result in the emergence of transmission of drug-resistant virus among persons newly infected with HIV-1. Russia is one of a growing number of countries in the world where drug-resistant HIV is becoming a serious health problem because it has the potential to compromise the efficacy of antiretroviral therapy (ART) at the population level.</p><sec><title>Materials and methods</title><p>Materials and methods. We performed a genetic analysis of the HIV-1 plasma derived pol gene among the newly diagnosed ART-naïve HIV-1 infected patients during the period from November 2018 to October 2019 in the St. Petersburg Clinical Infectious Diseases Hospital named after S.P. Botkin. We used reverse transcriptase polymerase chain reaction (RT-PCR) followed by direct sequencing of PCR products to determine the prevalence of primary drug resistance (PDR) conferring mutations. HIV-1 genotypes were determined by phylogenetic analysis.</p></sec><sec><title>Results</title><p>Results. The predominant HIV-1 subtype was A1 (87.2%), followed by B (11.8%) and CRF06_cpx (1%). The overall prevalence of PDR was 11%. Virus with known resistance-conferring mutations to any nucleoside reverse transcriptase inhibitors (NRTIs) was found in 8 individuals, to any non NRTIs in 5 subjects, and to any protease inhibitors in 1 case. Multidrug-resistant virus was identified in 2 individuals (2%).</p></sec><sec><title>Conclusion</title><p>Conclusion. The distribution of HIV-1 genotypes in St. Petersburg, Russia is diverse. The emerging prevalence of PDR in ART-naïve patients demonstrates the significance of constant monitoring due to the challenges it presents towards treatment.</p></sec></trans-abstract><kwd-group xml:lang="ru"><kwd>ВИЧ-1</kwd><kwd>лекарственная устойчивость</kwd><kwd>мутации</kwd><kwd>антиретровирусная терапия</kwd><kwd>лекарственная устойчивость ВИЧ-1</kwd></kwd-group><kwd-group xml:lang="en"><kwd>HIV-1</kwd><kwd>drug resistance</kwd><kwd>mutations</kwd><kwd>antiretroviral therapy</kwd><kwd>HIV-1 drug resistance</kwd></kwd-group></article-meta></front><back><ref-list><title>References</title><ref id="cit1"><label>1</label><citation-alternatives><mixed-citation xml:lang="ru">UNAIDS (2018). UNAIDS data 2018. State of the epidemic in Eastern Europe and Central Asia. Р. 273–278.</mixed-citation><mixed-citation xml:lang="en">UNAIDS (2018). UNAIDS data 2018. State of the epidemic in Eastern Europe and Central Asia. Р. 273–278.</mixed-citation></citation-alternatives></ref><ref id="cit2"><label>2</label><citation-alternatives><mixed-citation xml:lang="ru">Beyrer C., Wirtz A.L., O’Hara G., Léon N., Kazatchkine M. The expanding epidemic of HIV-1 in the Russian Federation // PLOS Medicine. 2017. Vol. 14 (11). e1002462. https://doi.org/10.1371/journal.pmed.1002462.</mixed-citation><mixed-citation xml:lang="en">Beyrer C., Wirtz A.L., O’Hara G., Léon N., Kazatchkine M. The expanding epidemic of HIV-1 in the Russian Federation // PLOS Medicine. 2017. Vol. 14 (11). e1002462. https://doi.org/10.1371/journal.pmed.1002462.</mixed-citation></citation-alternatives></ref><ref id="cit3"><label>3</label><citation-alternatives><mixed-citation xml:lang="ru">Clark F. World Report: Gaps remain in Russia’s response to HIV/AIDS // The Lancet. 2016. Vol. 388 (10047). Р. 857–858. https://doi.org/10.1016/S0140-6736(16)31480-5.</mixed-citation><mixed-citation xml:lang="en">Clark F. World Report: Gaps remain in Russia’s response to HIV/AIDS // The Lancet. 2016. Vol. 388 (10047). Р. 857–858. https://doi.org/10.1016/S0140-6736(16)31480-5.</mixed-citation></citation-alternatives></ref><ref id="cit4"><label>4</label><citation-alternatives><mixed-citation xml:lang="ru">Belyakov N.A., Rassokhin V.V., Semenov A.V., Konovalova N.V., Ogurtsova S.V., Svetlichnaya Yu.S., Boeva E.V., Bobreshova A.S., Esaulenko E.V., Sukhoruk A.A. HIV infection and comorbidal conditions in the northwestern federal district of the Russian Federation in 2016 // Аnalytical review. St. Petersburg, 2017.</mixed-citation><mixed-citation xml:lang="en">Belyakov N.A., Rassokhin V.V., Semenov A.V., Konovalova N.V., Ogurtsova S.V., Svetlichnaya Yu.S., Boeva E.V., Bobreshova A.S., Esaulenko E.V., Sukhoruk A.A. HIV infection and comorbidal conditions in the northwestern federal district of the Russian Federation in 2016 // Аnalytical review. St. Petersburg, 2017.</mixed-citation></citation-alternatives></ref><ref id="cit5"><label>5</label><citation-alternatives><mixed-citation xml:lang="ru">UNAIDS. Global HIV &amp; AIDS statistics 2020. Р. 1–7.</mixed-citation><mixed-citation xml:lang="en">UNAIDS. Global HIV &amp; AIDS statistics 2020. Р. 1–7.</mixed-citation></citation-alternatives></ref><ref id="cit6"><label>6</label><citation-alternatives><mixed-citation xml:lang="ru">UNAIDS 90–90–90, an ambitious treatment target to help end the AIDS epidemic. 2017. Р. 1–40.</mixed-citation><mixed-citation xml:lang="en">UNAIDS 90–90–90, an ambitious treatment target to help end the AIDS epidemic. 2017. Р. 1–40.</mixed-citation></citation-alternatives></ref><ref id="cit7"><label>7</label><citation-alternatives><mixed-citation xml:lang="ru">Phillips A.N., Stover J., Cambiano V., Nakagawa F., Jordan M.R., Pillay D. et al. Impact of HIV drug resistance on HIV/AIDS associated mortality, new infections and antiretroviral therapy program costs in sub-Saharan Africa // Journal of Infectious Diseases. 2017. Vol. 215 (9). Р. 1362–1365.</mixed-citation><mixed-citation xml:lang="en">Phillips A.N., Stover J., Cambiano V., Nakagawa F., Jordan M.R., Pillay D. et al. Impact of HIV drug resistance on HIV/AIDS associated mortality, new infections and antiretroviral therapy program costs in sub-Saharan Africa // Journal of Infectious Diseases. 2017. Vol. 215 (9). Р. 1362–1365.</mixed-citation></citation-alternatives></ref><ref id="cit8"><label>8</label><citation-alternatives><mixed-citation xml:lang="ru">WHO (2017). Guidelines on the public health response to pretreatment HIV drug resistance. Р. 1–84.</mixed-citation><mixed-citation xml:lang="en">WHO (2017). Guidelines on the public health response to pretreatment HIV drug resistance. Р. 1–84.</mixed-citation></citation-alternatives></ref><ref id="cit9"><label>9</label><citation-alternatives><mixed-citation xml:lang="ru">Hofstra L.M. High rates of transmission of drug-resistant HIV in Aruba resulting in reduced susceptibility to the WHO recommended first-line regimen in nearly half of newly diagnosed HIV-infected patients // Clinical Infectious Diseases. 2017. Vol. 64. Р. 1092–1097.</mixed-citation><mixed-citation xml:lang="en">Hofstra L.M. High rates of transmission of drug-resistant HIV in Aruba resulting in reduced susceptibility to the WHO recommended first-line regimen in nearly half of newly diagnosed HIV-infected patients // Clinical Infectious Diseases. 2017. Vol. 64. Р. 1092–1097.</mixed-citation></citation-alternatives></ref><ref id="cit10"><label>10</label><citation-alternatives><mixed-citation xml:lang="ru">Sanchez Rivas E., Nijhuis M., Bank L.E.A., Wilkinson E, Kelly K., Boden D., Hurley A., Zhang L. et al. HIV-1 drug resistance in newly infected individuals // The Journal of the American Medical Association. 1999. Vol. 282 (12). Р. 1135–1141.</mixed-citation><mixed-citation xml:lang="en">Sanchez Rivas E., Nijhuis M., Bank L.E.A., Wilkinson E, Kelly K., Boden D., Hurley A., Zhang L. et al. HIV-1 drug resistance in newly infected individuals // The Journal of the American Medical Association. 1999. Vol. 282 (12). Р. 1135–1141.</mixed-citation></citation-alternatives></ref><ref id="cit11"><label>11</label><citation-alternatives><mixed-citation xml:lang="ru">Chauhan C.K., Lakshmi P.V.M., Sagar V., Sharma A., Arora S.K., Kumar R. Primary HIV Drug Resistance among Recently Infected Cases of HIV in North-West India // AIDS Research and Treatment. 2019. 8 p.</mixed-citation><mixed-citation xml:lang="en">Chauhan C.K., Lakshmi P.V.M., Sagar V., Sharma A., Arora S.K., Kumar R. Primary HIV Drug Resistance among Recently Infected Cases of HIV in North-West India // AIDS Research and Treatment. 2019. 8 p.</mixed-citation></citation-alternatives></ref><ref id="cit12"><label>12</label><citation-alternatives><mixed-citation xml:lang="ru">Lebedeva N.N., Zverev S.Y., Kulagin V.V., Kurina N.V., Pronin A.Yu., Mikova O.E., Milovanova I.I., Polovitsa N.V., Sandyreva T.P., Sizova N.V., Sklyar L.F., Tertyshnaya Yu. N., Belkina N.S., Shemshura A.B., Bobkova M.R. HIV drug resistance early warning indicators and their assessment in some regions of Russia // HIV Infection and Immunosuppressive Disorders. 2018. Vol. 10 (4). Р. 67–75.</mixed-citation><mixed-citation xml:lang="en">Lebedeva N.N., Zverev S.Y., Kulagin V.V., Kurina N.V., Pronin A.Yu., Mikova O.E., Milovanova I.I., Polovitsa N.V., Sandyreva T.P., Sizova N.V., Sklyar L.F., Tertyshnaya Yu. N., Belkina N.S., Shemshura A.B., Bobkova M.R. HIV drug resistance early warning indicators and their assessment in some regions of Russia // HIV Infection and Immunosuppressive Disorders. 2018. Vol. 10 (4). Р. 67–75.</mixed-citation></citation-alternatives></ref><ref id="cit13"><label>13</label><citation-alternatives><mixed-citation xml:lang="ru">Struck D., Lawyer G., Ternes A.M., Schmit J.C., Bercoff D.P. COMET: adaptive context-based modeling for ultrafast HIV-1 subtype identification // Nucleic Acids Research. 2014. Vol. 42. Р. 144.</mixed-citation><mixed-citation xml:lang="en">Struck D., Lawyer G., Ternes A.M., Schmit J.C., Bercoff D.P. COMET: adaptive context-based modeling for ultrafast HIV-1 subtype identification // Nucleic Acids Research. 2014. Vol. 42. Р. 144.</mixed-citation></citation-alternatives></ref><ref id="cit14"><label>14</label><citation-alternatives><mixed-citation xml:lang="ru">Pineda-Pena A.C., Faria N.R., Imbrechts S., Libin P., Abecasis A.B., Deforche K. et al. Automated subtyping of HIV-1 genetic sequences for clinical and surveillance purposes: performance evaluation of the new REGA version 3 and seven other tools // Infection, Genetics and Evolution. 2013. Vol. 19. Р. 337–348.</mixed-citation><mixed-citation xml:lang="en">Pineda-Pena A.C., Faria N.R., Imbrechts S., Libin P., Abecasis A.B., Deforche K. et al. Automated subtyping of HIV-1 genetic sequences for clinical and surveillance purposes: performance evaluation of the new REGA version 3 and seven other tools // Infection, Genetics and Evolution. 2013. Vol. 19. Р. 337–348.</mixed-citation></citation-alternatives></ref><ref id="cit15"><label>15</label><citation-alternatives><mixed-citation xml:lang="ru">WHO (2016). Consolidated guidelines on the use of antiretroviral drugs for treating and preventing HIV infection. Recommendations for a public health approach. 2nd ed. Clinical guidelines HIV diagnosis, 2016. Р. 1–34.</mixed-citation><mixed-citation xml:lang="en">WHO (2016). Consolidated guidelines on the use of antiretroviral drugs for treating and preventing HIV infection. Recommendations for a public health approach. 2nd ed. Clinical guidelines HIV diagnosis, 2016. Р. 1–34.</mixed-citation></citation-alternatives></ref><ref id="cit16"><label>16</label><citation-alternatives><mixed-citation xml:lang="ru">Maldonado J. The HIV-1 Reverse Transcriptase A62V Mutation Influences Replication Fidelity and Viral Fitness in the Context of Multi-Drug- Resistant Mutations // Viruses. 2018. Vol. 10 (7). Р. 376.</mixed-citation><mixed-citation xml:lang="en">Maldonado J. The HIV-1 Reverse Transcriptase A62V Mutation Influences Replication Fidelity and Viral Fitness in the Context of Multi-Drug- Resistant Mutations // Viruses. 2018. Vol. 10 (7). Р. 376.</mixed-citation></citation-alternatives></ref><ref id="cit17"><label>17</label><citation-alternatives><mixed-citation xml:lang="ru">Hylton E., Wirtz A.L., Zelaya C.E, Latkin C., Peryshkina A., Mogilnyi V. et al. Sexual Identity, Stigma, and Depression: the Role of the «Antigay Propaganda Law» in Mental Health among Men Who Have Sex with Men in Moscow, Russia // Journal of Urban Health. 2017. Vol. 94 (3). Р. 319–329.</mixed-citation><mixed-citation xml:lang="en">Hylton E., Wirtz A.L., Zelaya C.E, Latkin C., Peryshkina A., Mogilnyi V. et al. Sexual Identity, Stigma, and Depression: the Role of the «Antigay Propaganda Law» in Mental Health among Men Who Have Sex with Men in Moscow, Russia // Journal of Urban Health. 2017. Vol. 94 (3). Р. 319–329.</mixed-citation></citation-alternatives></ref><ref id="cit18"><label>18</label><citation-alternatives><mixed-citation xml:lang="ru">Wirtz A.L., Zelaya C.E., Peryshkina A., Latkin C., Mogilnyi V., Galai N. et al. Social and structural risks for HIV among migrant and immigrant men who have sex with men in Moscow, Russia: Implications for prevention // AIDS Care. 2014. Vol. 26 (3). Р. 387–395.</mixed-citation><mixed-citation xml:lang="en">Wirtz A.L., Zelaya C.E., Peryshkina A., Latkin C., Mogilnyi V., Galai N. et al. Social and structural risks for HIV among migrant and immigrant men who have sex with men in Moscow, Russia: Implications for prevention // AIDS Care. 2014. Vol. 26 (3). Р. 387–395.</mixed-citation></citation-alternatives></ref><ref id="cit19"><label>19</label><citation-alternatives><mixed-citation xml:lang="ru">Deniz G., Cristiana O., Serhat U., Josip B The growing HIV epidemic in Central Europe: a neglected issue? // Journal of Virus Eradication. 2016. Vol. 2 (3). Р. 156–161.</mixed-citation><mixed-citation xml:lang="en">Deniz G., Cristiana O., Serhat U., Josip B The growing HIV epidemic in Central Europe: a neglected issue? // Journal of Virus Eradication. 2016. Vol. 2 (3). Р. 156–161.</mixed-citation></citation-alternatives></ref><ref id="cit20"><label>20</label><citation-alternatives><mixed-citation xml:lang="ru">Peltzer K. Correlates of HIV infection among people visiting public HIV counseling and testing clinics in Mpumalanga, South Africa // African Health Sciences. 2012. Vol. 12. Р. 8–16.</mixed-citation><mixed-citation xml:lang="en">Peltzer K. Correlates of HIV infection among people visiting public HIV counseling and testing clinics in Mpumalanga, South Africa // African Health Sciences. 2012. Vol. 12. Р. 8–16.</mixed-citation></citation-alternatives></ref><ref id="cit21"><label>21</label><citation-alternatives><mixed-citation xml:lang="ru">Zenin P.V., Pronin A., Serkov I.L., Khametova K.M., Orlova-Morozova E.A., Giliazova A.V. et al. Molecular epidemiology of HIV-1 strains in the Moscow Region // Problems of Virology. 2010. Vol. 55. Р. 25–29.</mixed-citation><mixed-citation xml:lang="en">Zenin P.V., Pronin A., Serkov I.L., Khametova K.M., Orlova-Morozova E.A., Giliazova A.V. et al. Molecular epidemiology of HIV-1 strains in the Moscow Region // Problems of Virology. 2010. Vol. 55. Р. 25–29.</mixed-citation></citation-alternatives></ref><ref id="cit22"><label>22</label><citation-alternatives><mixed-citation xml:lang="ru">Vinogradova A., Delgado E., Rakhmanova A., Yakovlev A., Cuevas M. T., Nájera R Thomson M. M. Molecular Epidemiology of HIV-1 in St. Petersburg, Russia: Predominance of Subtype A, Former Soviet Union Variant, and Identification of Intrasubtype Subclusters // Journal of Acquired Immune Deficiency Syndromes. 2009. Vol. 51 (3). Р. 332–339.</mixed-citation><mixed-citation xml:lang="en">Vinogradova A., Delgado E., Rakhmanova A., Yakovlev A., Cuevas M. T., Nájera R Thomson M. M. Molecular Epidemiology of HIV-1 in St. Petersburg, Russia: Predominance of Subtype A, Former Soviet Union Variant, and Identification of Intrasubtype Subclusters // Journal of Acquired Immune Deficiency Syndromes. 2009. Vol. 51 (3). Р. 332–339.</mixed-citation></citation-alternatives></ref><ref id="cit23"><label>23</label><citation-alternatives><mixed-citation xml:lang="ru">Lebedev A., Мoskaleychik F., Pronin A., Kazennova E., Bobkova M. Human Immunodeficiency Virus-1 Diversity in the Moscow Region, Russia: Phylodynamics of the Most Common Subtypes // Frontiers in Microbiology. 2019. Vol. 10. doi: 10.3389/fmicb.2019.00320.</mixed-citation><mixed-citation xml:lang="en">Lebedev A., Мoskaleychik F., Pronin A., Kazennova E., Bobkova M. Human Immunodeficiency Virus-1 Diversity in the Moscow Region, Russia: Phylodynamics of the Most Common Subtypes // Frontiers in Microbiology. 2019. Vol. 10. doi: 10.3389/fmicb.2019.00320.</mixed-citation></citation-alternatives></ref><ref id="cit24"><label>24</label><citation-alternatives><mixed-citation xml:lang="ru">Bbosa N., Kaleebu P., Ssemwanga D. HIV subtype diversity worldwide // Current Opinion in HIV and AIDS. 2019. Vol. 14 (3). Р. 153–160.</mixed-citation><mixed-citation xml:lang="en">Bbosa N., Kaleebu P., Ssemwanga D. HIV subtype diversity worldwide // Current Opinion in HIV and AIDS. 2019. Vol. 14 (3). Р. 153–160.</mixed-citation></citation-alternatives></ref><ref id="cit25"><label>25</label><citation-alternatives><mixed-citation xml:lang="ru">Buchacz K., Young B., Palella F. J., Armon C., Brooks J. T… Trends in use of genotypic resistance testing and frequency of major drug resistance among antiretroviral-naive persons in the HIV Outpatient Study, 1999–2011 // Journal of Antimicrobial Chemotherapy. 2015. Vol. 70 (8). Р. 2337–2346.</mixed-citation><mixed-citation xml:lang="en">Buchacz K., Young B., Palella F. J., Armon C., Brooks J. T… Trends in use of genotypic resistance testing and frequency of major drug resistance among antiretroviral-naive persons in the HIV Outpatient Study, 1999–2011 // Journal of Antimicrobial Chemotherapy. 2015. Vol. 70 (8). Р. 2337–2346.</mixed-citation></citation-alternatives></ref><ref id="cit26"><label>26</label><citation-alternatives><mixed-citation xml:lang="ru">Hofstra L.M. et al. Transmission of HIV Drug Resistance and the Predicted Effect on Current First-line Regimens in Europe // Clinical infectious diseases: an official publication of the Infectious Diseases Society of America. 2016. Vol. 62. Р. 655–663.</mixed-citation><mixed-citation xml:lang="en">Hofstra L.M. et al. Transmission of HIV Drug Resistance and the Predicted Effect on Current First-line Regimens in Europe // Clinical infectious diseases: an official publication of the Infectious Diseases Society of America. 2016. Vol. 62. Р. 655–663.</mixed-citation></citation-alternatives></ref><ref id="cit27"><label>27</label><citation-alternatives><mixed-citation xml:lang="ru">Zhao S., Feng Y., Hu J. et al. Prevalence of Transmitted HIV drug resistance in antiretroviral treatment naïve newly diagnosed individuals in China // Scientific Reports. 2018. Vol. 8. Р. 12273.</mixed-citation><mixed-citation xml:lang="en">Zhao S., Feng Y., Hu J. et al. Prevalence of Transmitted HIV drug resistance in antiretroviral treatment naïve newly diagnosed individuals in China // Scientific Reports. 2018. Vol. 8. Р. 12273.</mixed-citation></citation-alternatives></ref><ref id="cit28"><label>28</label><citation-alternatives><mixed-citation xml:lang="ru">Pace C.A., Lioznov D., Cheng D.M., Wakeman S.E., Raj A., Walley A.Y., Samet J.H. Sexually transmitted infections among HIV-infected heavy drinkers in St Petersburg, Russia. International // Journal of STD &amp; AIDS. 2012. Vol. 23 (12). Р. 853–858.</mixed-citation><mixed-citation xml:lang="en">Pace C.A., Lioznov D., Cheng D.M., Wakeman S.E., Raj A., Walley A.Y., Samet J.H. Sexually transmitted infections among HIV-infected heavy drinkers in St Petersburg, Russia. International // Journal of STD &amp; AIDS. 2012. Vol. 23 (12). Р. 853–858.</mixed-citation></citation-alternatives></ref><ref id="cit29"><label>29</label><citation-alternatives><mixed-citation xml:lang="ru">Bennett D.E., Myatt M., Bertagnolio S., Sutherland D., Gilks C.F. Recommendations for surveillance of transmitted HIV drug resistance in countries scaling up antiretroviral treatment // Antiviral Therapy. 2008. Vol. 13 (2). p. 25–36.</mixed-citation><mixed-citation xml:lang="en">Bennett D.E., Myatt M., Bertagnolio S., Sutherland D., Gilks C.F. Recommendations for surveillance of transmitted HIV drug resistance in countries scaling up antiretroviral treatment // Antiviral Therapy. 2008. Vol. 13 (2). p. 25–36.</mixed-citation></citation-alternatives></ref><ref id="cit30"><label>30</label><citation-alternatives><mixed-citation xml:lang="ru">Kirichenko A.A., Kireev D.E., Lopatukhin A.E., Murzakova A.V., Lapovok I.A., Ladnaya N.N., Pokrovsky V.V. Prevalence and structure of HIV-1 drug resistance among treatment naïve patients since the introduction of antiretroviral therapy in the Russian Federation // HIV Infection and Immunosuppressive Disorders. 2019. Vоl. 11 (2). Р. 75–83.</mixed-citation><mixed-citation xml:lang="en">Kirichenko A.A., Kireev D.E., Lopatukhin A.E., Murzakova A.V., Lapovok I.A., Ladnaya N.N., Pokrovsky V.V. Prevalence and structure of HIV-1 drug resistance among treatment naïve patients since the introduction of antiretroviral therapy in the Russian Federation // HIV Infection and Immunosuppressive Disorders. 2019. Vоl. 11 (2). Р. 75–83.</mixed-citation></citation-alternatives></ref><ref id="cit31"><label>31</label><citation-alternatives><mixed-citation xml:lang="ru">Oroz M., Begovac J., Planinić A. et al. Analysis of HIV-1 diversity, primary drug resistance and transmission networks in Croatia // Scientific Reports. 2019. Vоl. 9. Р. 17307.</mixed-citation><mixed-citation xml:lang="en">Oroz M., Begovac J., Planinić A. et al. Analysis of HIV-1 diversity, primary drug resistance and transmission networks in Croatia // Scientific Reports. 2019. Vоl. 9. Р. 17307.</mixed-citation></citation-alternatives></ref><ref id="cit32"><label>32</label><citation-alternatives><mixed-citation xml:lang="ru">Zaitseva N.N., Parfenova O.Yu. Analysis of spread of initial resistance of HIV to antiretroviral medicines in Privolzhsky Federal District // World of Transport and Transportation. 2016. Vоl. 14 (3). Р. 93–35.</mixed-citation><mixed-citation xml:lang="en">Zaitseva N.N., Parfenova O.Yu. Analysis of spread of initial resistance of HIV to antiretroviral medicines in Privolzhsky Federal District // World of Transport and Transportation. 2016. Vоl. 14 (3). Р. 93–35.</mixed-citation></citation-alternatives></ref></ref-list><fn-group><fn fn-type="conflict"><p>The authors declare that there are no conflicts of interest present.</p></fn></fn-group></back></article>
